STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2242KEGG: bja:blr4337 hypothetical protein. (378 aa)    
Predicted Functional Partners:
Hbal_2241
PFAM: LytTr DNA-binding region; KEGG: xac:XAC1874 regulatory protein.
 
     0.886
Hbal_0195
KEGG: cak:Caul_2882 regulatory protein FlaEY.
  
     0.453
Hbal_2690
TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xca:xccb100_3821 TonB-dependent outer membrane receptor precursor.
  
     0.435
Hbal_1415
KEGG: pzu:PHZ_c1109 hypothetical protein.
 
     0.432
Hbal_0132
KEGG: ilo:IL0583 OmpA family Oar-like outer membrane protein protein.
  
     0.418
Hbal_0763
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: ccs:CCNA_03252 transcriptional regulatory protein.
  
     0.404
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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