STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2473PFAM: Aldehyde Dehydrogenase; KEGG: pla:Plav_3253 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (482 aa)    
Predicted Functional Partners:
Hbal_2472
PFAM: cytochrome P450; KEGG: pla:Plav_3499 cytochrome P450.
 
 
 0.769
Hbal_1486
PFAM: iron-containing alcohol dehydrogenase; KEGG: atc:AGR_pAT_199 hypothetical protein.
 
 
 0.572
Hbal_1682
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: hch:HCH_05072 Na+/proline symporter.
  
 
 0.567
Hbal_2471
PFAM: ferredoxin; KEGG: oca:OCAR_7389 ferredoxin.
   
 
 0.561
Hbal_2474
Hypothetical protein; KEGG: pla:Plav_3500 MarR family transcriptional regulator.
       0.556
Hbal_0205
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: ccs:CCNA_03722 glutamate synthase (NADPH) large chain.
  
  
 0.501
Hbal_1313
KEGG: pla:Plav_1491 AMP-dependent synthetase and ligase.
  
 
 0.427
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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