STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2535TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (252 aa)    
Predicted Functional Partners:
Hbal_2532
PFAM: MotA/TolQ/ExbB proton channel; KEGG: sbn:Sbal195_4371 MotA/TolQ/ExbB proton channel.
 
 
 0.944
Hbal_2534
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hha:Hhal_0452 biopolymer transport protein ExbD/TolR.
 
 
 0.933
Hbal_2533
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sbm:Shew185_4238 biopolymer transport protein ExbD/TolR.
 
 
 0.918
Hbal_0726
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pat:Patl_0767 TonB-dependent receptor.
  
 
 0.829
Hbal_2799
TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_01051 TonB-dependent receptor.
  
 
 0.829
Hbal_2531
PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: bmj:BMULJ_04725 oxygenase superfamily alpha subunit.
 
    0.759
Hbal_2155
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2735 TonB-dependent receptor.
 
 
 
 0.667
Hbal_2530
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: psa:PST_0996 TonB-dependent siderophore receptor.
 
   
 0.624
Hbal_1479
PFAM: MotA/TolQ/ExbB proton channel; KEGG: sit:TM1040_0349 MotA/TolQ/ExbB proton channel.
 
 
 0.611
Hbal_2394
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pla:Plav_2120 biopolymer transport TolR.
  
 
 0.600
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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