STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2537PFAM: major facilitator superfamily MFS_1; KEGG: cak:Caul_1791 major facilitator transporter. (440 aa)    
Predicted Functional Partners:
Hbal_2539
KEGG: cak:Caul_1794 hypothetical protein.
 
     0.859
Hbal_2538
PFAM: Luciferase-like monooxygenase; KEGG: ccs:CCNA_01227 nitrilotriacetate monooxygenase.
 
     0.827
Hbal_1162
PFAM: protein of unknown function DUF328; KEGG: ccs:CCNA_03496 cytosolic protein; Belongs to the UPF0246 family.
  
    0.646
Hbal_2667
PFAM: peptidase M61 domain protein; KEGG: xac:XAC0172 hypothetical protein.
  
     0.597
Hbal_2670
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c0750 TonB-dependent receptor.
  
     0.535
Hbal_2494
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spl:Spea_1138 TonB-dependent receptor plug.
  
     0.533
Hbal_0597
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pla:Plav_1064 antibiotic biosynthesis monooxygenase.
  
     0.525
Hbal_2536
PFAM: isochorismatase hydrolase; KEGG: cak:Caul_1793 isochorismatase hydrolase.
  
     0.470
Hbal_2555
PFAM: Acetamidase/Formamidase; KEGG: cak:Caul_1803 acetamidase/formamidase.
  
     0.450
Hbal_1525
KEGG: pla:Plav_0538 hypothetical protein.
  
     0.443
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.