STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2596PFAM: conserved hypothetical protein; KEGG: dol:Dole_2301 hypothetical protein. (386 aa)    
Predicted Functional Partners:
Hbal_2595
PFAM: protein of unknown function DUF112 transmembrane; KEGG: mmw:Mmwyl1_1910 hypothetical protein.
 
  
 0.975
Hbal_2594
Hypothetical protein.
       0.642
Hbal_2593
PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: bra:BRADO2379 protocatechuate 4,5-dioxygenase subunit alpha.
 
     0.571
Hbal_2597
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_0377 TonB-dependent receptor.
       0.551
Hbal_2592
PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bbt:BBta_2734 protocatechuate 4,5-dioxygenase subunit beta.
 
     0.520
Hbal_2641
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: mno:Mnod_1632 transcriptional regulator, IclR family.
 
   
 0.487
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.