STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2600Xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 43; KEGG: sde:Sde_0598 alpha-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. (580 aa)    
Predicted Functional Partners:
Hbal_2804
PFAM: glycoside hydrolase family 43; KEGG: xcv:XCV0150 xylosidase precursor; Belongs to the glycosyl hydrolase 43 family.
  
  
 
0.929
Hbal_2791
Xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 43; KEGG: pzu:PHZ_c2480 xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
 
0.908
Hbal_2801
KEGG: pat:Patl_2657 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
 0.871
Hbal_2976
KEGG: pat:Patl_2657 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
 0.841
uxaC
PFAM: Glucuronate isomerase; KEGG: sde:Sde_0940 glucuronate isomerase.
    
 0.807
Hbal_2792
Alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; glycoside hydrolase family 67; KEGG: xac:XAC4227 alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
   
 0.793
Hbal_0573
PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: cja:CJA_2769 alpha-L-arabinofuranosidase, abf51A.
 
   
 0.772
Hbal_2800
Xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 43; KEGG: sde:Sde_0822 alpha-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.744
Hbal_2622
PFAM: Pectinesterase; KEGG: sde:Sde_0944 ribosomal protein L30.
 
     0.674
Hbal_2616
PFAM: glycoside hydrolase family 9; KEGG: sde:Sde_0649 cellulose 1,4-beta-cellobiosidase.
  
  
 0.672
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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