STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2611KEGG: bja:blr3843 hypothetical protein. (299 aa)    
Predicted Functional Partners:
Hbal_2609
PFAM: HpcH/HpaI aldolase; KEGG: hypothetical protein.
 
    0.922
Hbal_2608
PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: reu:Reut_B5775 protocatechuate 4,5-dioxygenase subunit beta.
 
     0.853
Hbal_2606
PFAM: amidohydrolase 2; KEGG: reu:Reut_B5784 amidohydrolase 2.
 
     0.843
Hbal_2605
PFAM: amidohydrolase 2; KEGG: bxe:Bxe_B2314 putative 4-oxalomesaconate hydratase.
 
     0.785
Hbal_2610
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rpd:RPD_3688 hypothetical protein.
 
     0.762
Hbal_2782
KEGG: xau:Xaut_1082 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.704
Hbal_2592
PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bbt:BBta_2734 protocatechuate 4,5-dioxygenase subunit beta.
  
     0.638
Hbal_2783
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sde:Sde_2265 2-isopropylmalate synthase.
  
  
 0.625
Hbal_2582
PFAM: amidohydrolase 2; KEGG: hypothetical protein.
 
     0.623
Hbal_2640
TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2 conserved barrel domain protein; KEGG: lch:Lcho_0799 gentisate 1,2-dioxygenase.
  
     0.588
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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