STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2624PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: pzu:PHZ_c2113 hypothetical protein. (312 aa)    
Predicted Functional Partners:
Hbal_1105
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pla:Plav_2305 thioredoxin reductase.
  
 
 0.784
Hbal_2625
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pzu:PHZ_c0622 amidohydrolase.
       0.663
Hbal_2626
PFAM: amidohydrolase; KEGG: pzu:PHZ_c1859 imidazolonepropionase.
       0.661
Hbal_2627
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ccs:CCNA_02050 dihydroorotase.
       0.661
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
    
 
 0.609
Hbal_0952
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: ccs:CCNA_00217 thiol:disulfide interchange protein DsbD.
   
 
 0.593
Hbal_2623
TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: swp:swp_0003 sodium:alanine symporter.
       0.586
hslU
Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
  
 
 0.493
Hbal_2628
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pzu:PHZ_c2731 TonB-dependent receptor.
  
    0.491
Hbal_0205
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: ccs:CCNA_03722 glutamate synthase (NADPH) large chain.
   
 
 0.483
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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