STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2641PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: mno:Mnod_1632 transcriptional regulator, IclR family. (256 aa)    
Predicted Functional Partners:
Hbal_2640
TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2 conserved barrel domain protein; KEGG: lch:Lcho_0799 gentisate 1,2-dioxygenase.
 
     0.840
Hbal_2754
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: mno:Mnod_6621 transcriptional regulator, IclR family.
  
     0.738
Hbal_2562
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: rpt:Rpal_5040 transcriptional regulator, IclR family.
  
     0.736
Hbal_0172
PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: dat:HRM2_46540 putative allophanate hydrolase subunit 1.
  
    0.654
Hbal_2638
TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO0684 maleylacetoacetate isomerase, MAAI (glutathione S-transferase zeta 1, GSTZ1-1).
 
     0.629
Hbal_0171
PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; KEGG: spe:Spro_1256 UreA amidolyase related protein.
  
    0.626
Hbal_2639
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ara:Arad_7200 fumarylpyruvate hydrolase protein.
 
     0.596
Hbal_2642
PFAM: glycoside hydrolase family 3 domain protein; KEGG: rle:RL4489 putative glycosyl hydrolase.
       0.536
Hbal_2643
PFAM: glycoside hydrolase family 3 domain protein; KEGG: beta-glucosidase-related glycosidases.
       0.536
Hbal_0098
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ccs:CCNA_03791 transcriptional regulator, MarR family.
  
  
 0.494
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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