STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2669PFAM: amino acid permease-associated region; KEGG: bpt:Bpet3919 amino acid transporter. (441 aa)    
Predicted Functional Partners:
Hbal_2668
PFAM: aminotransferase class I and II; KEGG: hypothetical protein.
 
  
 0.909
Hbal_2670
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c0750 TonB-dependent receptor.
 
     0.850
Hbal_2667
PFAM: peptidase M61 domain protein; KEGG: xac:XAC0172 hypothetical protein.
 
     0.805
Hbal_1872
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sit:TM1040_0418 alpha amylase, catalytic region.
    
 0.725
Hbal_1873
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ccs:CCNA_02368 alpha-glucosidase.
    
 0.725
Hbal_2467
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cak:Caul_4090 alpha amylase catalytic region.
    
 0.725
Hbal_2468
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ccs:CCNA_02368 alpha-glucosidase.
    
 0.725
Hbal_0711
PFAM: amino acid permease-associated region; Amino acid transporter transmembrane; KEGG: tcx:Tcr_1908 amino acid permease-associated region.
  
     0.691
Hbal_2672
PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: sil:SPO3832 ornithine cyclodeaminase/mu-crystallin family protein.
 
     0.668
Hbal_2674
PFAM: aminotransferase class V; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cak:Caul_5082 aminotransferase class V.
  
     0.648
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.