STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2770PFAM: major facilitator superfamily MFS_1; KEGG: pha:PSHAa1746 hexuronate transport protein (MFS). (436 aa)    
Predicted Functional Partners:
Hbal_2771
PFAM: Heparinase II/III family protein; KEGG: avn:Avin_46500 alginate lyase.
 
    0.924
Hbal_2772
KEGG: pat:Patl_3659 poly(beta-D-mannuronate) lyase.
 
    0.924
Hbal_2769
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sde:Sde_3281 hypothetical protein.
 
    0.876
Hbal_2773
TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sde:Sde_2991 hypothetical protein.
 
    0.818
Hbal_2774
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sml:Smlt2599 putative GntR family transcriptional regulator.
 
     0.809
Hbal_2747
TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_3650 TonB-dependent receptor.
  
    0.751
Hbal_2765
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sde:Sde_0954 GntR family transcriptional regulator.
 
     0.710
Hbal_2787
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ccs:CCNA_01037 transcriptional regulator, GntR family.
 
     0.702
Hbal_2761
PFAM: RhaT l-rhamnose-proton symport 2; KEGG: avn:Avin_09150 RhaT L-rhamnose-proton symport 2.
  
    0.511
Hbal_2570
PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bur:Bcep18194_B0417 major facilitator transporter.
  
     0.473
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.