STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_2927TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein; KEGG: amc:MADE_02833 phage shock protein A. (222 aa)    
Predicted Functional Partners:
Hbal_2929
TIGRFAM: phage shock protein C; PFAM: PspC domain protein; KEGG: ilo:IL0729 putative stress-responsive transcriptional regulator.
 
 
 0.998
Hbal_2928
TIGRFAM: phage shock protein B; KEGG: amc:MADE_02832 phage shock protein B.
     
 0.792
Hbal_2925
Sigma54 specific transcriptional activator, PspF, Fis family; KEGG: she:Shewmr4_2483 fis family transcriptional regulator; TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
 
   0.750
Hbal_2926
Hypothetical protein.
       0.686
Hbal_0126
Putative PAS/PAC sensor protein; KEGG: pzu:PHZ_c1163 sensor histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: response regulator receiver; PAC repeat-containing protein; PAS domain containing protein.
    
 
 0.574
Hbal_2647
Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: dat:HRM2_43250 sensory box histidine kinase/response regulator.
    
 
 0.559
Hbal_1285
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pzu:PHZ_c2681 sensor histidine kinase (non-motile and phage-resistance protein).
    
 
 0.542
Hbal_2990
PFAM: alpha/beta hydrolase fold; KEGG: pzu:PHZ_c2949 lysophospholipase L2.
  
     0.514
Hbal_2930
Hypothetical protein.
       0.479
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
      
 0.435
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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