STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_3005Hypothetical protein; KEGG: GM13394 gene product from transcript GM13394-RA. (239 aa)    
Predicted Functional Partners:
Hbal_3006
PFAM: protein of unknown function DUF1674; KEGG: ccs:CCNA_00102 cytosolic protein.
       0.675
Hbal_3007
PFAM: peptidase M48 Ste24p; KEGG: pzu:PHZ_c0349 Zn-dependent protease with chaperone function.
       0.464
Hbal_3008
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: bra:BRADO0340 putative ribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase)(RsmB); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.464
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.