Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TES1_1007ABC-type transport system, periplasmic component; COG1744. (441 aa)    
Predicted Functional Partners:
TES1_1006
ABC-type transport system, ATPase component; COG3845.
 
 
 0.998
TES1_1004
ABC-type transport system, permease component; COG1079.
 
 
 0.996
TES1_1005
ABC-type transport system, permease component; COG4603.
 
 
 0.994
TES1_1008
Hypothetical protein; COG1683.
       0.818
ftsY
Signal recognition particle GTPase; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.609
TES1_0345
Adenine phosphoribosyltransferase; COG0503.
 
   
 0.463
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
     
 0.411
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; COG0152; Belongs to the SAICAR synthetase family.
      
 0.408
TES1_1985
5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase; COG1759.
      
 0.408
Your Current Organism:
Thermococcus paralvinellae
NCBI taxonomy Id: 582419
Other names: DSM 27261, KACC 17923, T. paralvinellae, Thermococcus paralvinellae Hensley et al. 2014, Thermococcus sp. ES1, hyperthermophilic archaeon ES1, strain ES1
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