STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TES1_1134Nucleotidyltransferase; COG2413. (235 aa)    
Predicted Functional Partners:
TES1_1133
Hypothetical protein.
       0.660
TES1_1352
Hypothetical protein; COG2248; Belongs to the UPF0282 family.
  
     0.540
TES1_1530
RNA-binding protein, containing THUMP domain; COG1818.
  
     0.529
TES1_0762
Hypothetical protein containing KH domain; COG0195.
  
     0.526
TES1_0690
Hypothetical protein; COG2090.
  
     0.493
TES1_1511
Hypothetical protein; COG1931; Belongs to the UPF0201 family.
  
     0.482
TES1_0041
Hypothetical protein; COG2108.
 
     0.463
TES1_1873
Hypothetical protein; COG2433.
  
     0.454
nusA
Transcription elongation factor NusA-like protein; Participates in transcription termination. Belongs to the NusA family.
  
     0.449
TES1_1800
Transcriptional regulator, AsnC family; COG1522.
  
     0.437
Your Current Organism:
Thermococcus paralvinellae
NCBI taxonomy Id: 582419
Other names: DSM 27261, KACC 17923, T. paralvinellae, Thermococcus paralvinellae Hensley et al. 2014, Thermococcus sp. ES1, hyperthermophilic archaeon ES1, strain ES1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.