Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TES1_0041 | TES1_1253 | TES1_0041 | TES1_1253 | Hypothetical protein; COG2108. | Hypothetical protein; COG0175. | 0.587 |
TES1_0539 | TES1_1253 | TES1_0539 | TES1_1253 | Tungstate ABC transporter, permease protein WtpB; COG0555. | Hypothetical protein; COG0175. | 0.754 |
TES1_0539 | TES1_2033 | TES1_0539 | TES1_2033 | Tungstate ABC transporter, permease protein WtpB; COG0555. | Glycosyl transferase family protein 13; COG0438. | 0.610 |
TES1_0539 | cysC | TES1_0539 | TES1_2012 | Tungstate ABC transporter, permease protein WtpB; COG0555. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.932 |
TES1_0539 | hcp | TES1_0539 | TES1_0856 | Tungstate ABC transporter, permease protein WtpB; COG0555. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.919 |
TES1_1252 | TES1_1253 | TES1_1252 | TES1_1253 | S-adenosylhomocysteine deaminase; COG0402. | Hypothetical protein; COG0175. | 0.661 |
TES1_1252 | TES1_1254 | TES1_1252 | TES1_1254 | S-adenosylhomocysteine deaminase; COG0402. | Hypothetical protein; COG2512. | 0.666 |
TES1_1252 | TES1_1255 | TES1_1252 | TES1_1255 | S-adenosylhomocysteine deaminase; COG0402. | Hypothetical protein; COG1326. | 0.533 |
TES1_1252 | TES1_1257 | TES1_1252 | TES1_1257 | S-adenosylhomocysteine deaminase; COG0402. | Phosphoserine phosphatase; COG0560. | 0.475 |
TES1_1253 | TES1_0041 | TES1_1253 | TES1_0041 | Hypothetical protein; COG0175. | Hypothetical protein; COG2108. | 0.587 |
TES1_1253 | TES1_0539 | TES1_1253 | TES1_0539 | Hypothetical protein; COG0175. | Tungstate ABC transporter, permease protein WtpB; COG0555. | 0.754 |
TES1_1253 | TES1_1252 | TES1_1253 | TES1_1252 | Hypothetical protein; COG0175. | S-adenosylhomocysteine deaminase; COG0402. | 0.661 |
TES1_1253 | TES1_1254 | TES1_1253 | TES1_1254 | Hypothetical protein; COG0175. | Hypothetical protein; COG2512. | 0.795 |
TES1_1253 | TES1_1255 | TES1_1253 | TES1_1255 | Hypothetical protein; COG0175. | Hypothetical protein; COG1326. | 0.809 |
TES1_1253 | TES1_1257 | TES1_1253 | TES1_1257 | Hypothetical protein; COG0175. | Phosphoserine phosphatase; COG0560. | 0.581 |
TES1_1253 | TES1_2033 | TES1_1253 | TES1_2033 | Hypothetical protein; COG0175. | Glycosyl transferase family protein 13; COG0438. | 0.592 |
TES1_1253 | cysC | TES1_1253 | TES1_2012 | Hypothetical protein; COG0175. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.994 |
TES1_1253 | hcp | TES1_1253 | TES1_0856 | Hypothetical protein; COG0175. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.830 |
TES1_1253 | sat | TES1_1253 | TES1_2007 | Hypothetical protein; COG0175. | Sulfate adenylyltransferase; COG2046; Belongs to the sulfate adenylyltransferase family. | 0.788 |
TES1_1254 | TES1_1252 | TES1_1254 | TES1_1252 | Hypothetical protein; COG2512. | S-adenosylhomocysteine deaminase; COG0402. | 0.666 |
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