Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMY32810.1 | KMY33923.1 | ACZ11_12035 | ACZ11_02265 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
KMY33920.1 | KMY33921.1 | ACZ11_02250 | ACZ11_02255 | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
KMY33920.1 | KMY33923.1 | ACZ11_02250 | ACZ11_02265 | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.514 |
KMY33920.1 | menC | ACZ11_02250 | ACZ11_02260 | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.705 |
KMY33921.1 | KMY33920.1 | ACZ11_02255 | ACZ11_02250 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
KMY33921.1 | KMY33923.1 | ACZ11_02255 | ACZ11_02265 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.592 |
KMY33921.1 | menC | ACZ11_02255 | ACZ11_02260 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.924 |
KMY33923.1 | KMY32810.1 | ACZ11_02265 | ACZ11_12035 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
KMY33923.1 | KMY33920.1 | ACZ11_02265 | ACZ11_02250 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.514 |
KMY33923.1 | KMY33921.1 | ACZ11_02265 | ACZ11_02255 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.592 |
KMY33923.1 | menC | ACZ11_02265 | ACZ11_02260 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.569 |
menC | KMY33920.1 | ACZ11_02260 | ACZ11_02250 | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.705 |
menC | KMY33921.1 | ACZ11_02260 | ACZ11_02255 | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.924 |
menC | KMY33923.1 | ACZ11_02260 | ACZ11_02265 | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.569 |