STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERN42849.1Ankyrin repeat-containing protein; COG: FOG: Ankyrin repeat; PFAM: Ank_2 - Ankyrin repeats (3 copies). (353 aa)    
Predicted Functional Partners:
ERN41671.1
Partial gene; COG: NADPH:quinone reductase and related Zn-dependent oxidoreductases; PFAM: ADH_zinc_N - Zinc-binding dehydrogenase; PP-binding - Phosphopantetheine attachment site; ADH_N - Alcohol dehydrogenase GroES-like domain; Methyltransf_12 - Methyltransferase domain; KR - KR domain.
 
 0.904
ERN39843.1
Partial gene; COG: NADPH:quinone reductase and related Zn-dependent oxidoreductases; PFAM: ADH_zinc_N - Zinc-binding dehydrogenase; PP-binding - Phosphopantetheine attachment site; ADH_N - Alcohol dehydrogenase GroES-like domain; Methyltransf_12 - Methyltransferase domain; KR - KR domain.
 
 0.903
ERN40906.1
Partial gene; COG: Polyketide synthase modules and related proteins; PFAM: ketoacyl-synt - Beta-ketoacyl synthase, N-terminal domain; Acyl_transf_1 - Acyl transferase domain; Ketoacyl-synt_C - Beta-ketoacyl synthase, C-terminal domain.
  
 0.887
ERN40846.1
Partial gene; COG: Polyketide synthase modules and related proteins; PFAM: ketoacyl-synt - Beta-ketoacyl synthase, N-terminal domain; Acyl_transf_1 - Acyl transferase domain; Ketoacyl-synt_C - Beta-ketoacyl synthase, C-terminal domain.
  
 0.887
ERN40832.1
COG: Polyketide synthase modules and related proteins; PFAM: ADH_zinc_N - Zinc-binding dehydrogenase; ketoacyl-synt - Beta-ketoacyl synthase, N-terminal domain; PP-binding - Phosphopantetheine attachment site; Acyl_transf_1 - Acyl transferase domain; Ketoacyl-synt_C - Beta-ketoacyl synthase, C-terminal domain; ADH_N - Alcohol dehydrogenase GroES-like domain; Methyltransf_12 - Methyltransferase domain; KR - KR domain.
  
 0.887
ERN42090.1
Natural product biosynthesis luciferase-like monooxygenase domain protein; COG: Polyketide synthase modules and related proteins; PFAM: ketoacyl-synt - Beta-ketoacyl synthase, N-terminal domain; Bac_luciferase - Luciferase-like monooxygenase; PP-binding - Phosphopantetheine attachment site; Acyl_transf_1 - Acyl transferase domain; Ketoacyl-synt_C - Beta-ketoacyl synthase, C-terminal domain; Methyltransf_12 - Methyltransferase domain; TIGRFAM: natural product biosynthesis luciferase-like monooxygenase domain.
  
 0.879
ERN42984.1
COG: FOG: TPR repeat; PFAM: TPR_1 - Tetratricopeptide repeat; TPR_11 - TPR repeat.
 
 0.775
ERN41464.1
Ankyrin repeat-containing protein; COG: FOG: Ankyrin repeat; PFAM: Ank_2 - Ankyrin repeats (3 copies).
  
     0.772
ERN41913.1
Ankyrin repeat-containing protein; COG: FOG: Ankyrin repeat; PFAM: Ank_2 - Ankyrin repeats (3 copies).
  
     0.754
ERN42848.1
COG: Putative intracellular protease/amidase; PFAM: DJ-1_PfpI - DJ-1/PfpI family.
 
 
  0.742
Your Current Organism:
Rubidibacter lacunae
NCBI taxonomy Id: 582515
Other names: R. lacunae KORDI 51-2, Rubidibacter lacunae KCTC 40015, Rubidibacter lacunae KORDI 51-2, Rubidibacter lacunae UTEX L2944
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.