STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERN41975.1COG: ABC-type multidrug transport system, ATPase component; PFAM: ABC_tran - ABC transporter. (283 aa)    
Predicted Functional Partners:
ERN41660.1
COG: ABC-type multidrug transport system, permease component; PFAM: ABC2_membrane - ABC-2 type transporter.
 
 
 0.869
ERN41858.1
COG: ABC-type transport system involved in multi-copper enzyme maturation, permease component; PFAM: ABC2_membrane_2 - ABC-2 family transporter protein; TIGRFAM:.
  
 0.656
ERN39887.1
COG: ABC-type transport system involved in multi-copper enzyme maturation, permease component; PFAM: ABC2_membrane_2 - ABC-2 family transporter protein.
  
 0.656
ERN40976.1
COG: ABC-type multidrug transport system, permease component; PFAM: ABC2_membrane - ABC-2 type transporter.
 
 
 0.579
ERN42088.1
Amino acid adenylation domain protein; COG: Non-ribosomal peptide synthetase modules and related proteins; PFAM: AMP-binding - AMP-binding enzyme; PP-binding - Phosphopantetheine attachment site; Condensation - Condensation domain; HxxPF_rpt - HxxPF-repeated domain; TIGRFAM: amino acid adenylation domain.
 
  
 0.525
atpD
ATP synthase, F1 beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.519
atpA
Proton translocating ATP synthase, F1 alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.509
atpG
ATP synthase, F1 gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.507
atpC
ATP synthase, F1 epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.504
ERN42091.1
COG: Polyketide synthase modules and related proteins; PFAM: ADH_zinc_N - Zinc-binding dehydrogenase; ketoacyl-synt - Beta-ketoacyl synthase, N-terminal domain; AMP-binding - AMP-binding enzyme; PP-binding - Phosphopantetheine attachment site; Acyl_transf_1 - Acyl transferase domain; Ketoacyl-synt_C - Beta-ketoacyl synthase, C-terminal domain; ADH_N - Alcohol dehydrogenase GroES-like domain; Methyltransf_12 - Methyltransferase domain; KR - KR domain.
  
  
 0.481
Your Current Organism:
Rubidibacter lacunae
NCBI taxonomy Id: 582515
Other names: R. lacunae KORDI 51-2, Rubidibacter lacunae KCTC 40015, Rubidibacter lacunae KORDI 51-2, Rubidibacter lacunae UTEX L2944
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