STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERN41606.1COG: Bacteriophage protein gp37; PFAM: Gp37_Gp68 - Phage protein Gp37/Gp68. (239 aa)    
Predicted Functional Partners:
ERN41605.1
Hypothetical protein.
 
  
 0.879
ERN41604.1
PFAM: YgbA_NO - Nitrous oxide-stimulated promoter.
       0.548
ERN41607.1
Hypothetical protein.
       0.527
ERN41608.1
Hypothetical protein.
       0.402
Your Current Organism:
Rubidibacter lacunae
NCBI taxonomy Id: 582515
Other names: R. lacunae KORDI 51-2, Rubidibacter lacunae KCTC 40015, Rubidibacter lacunae KORDI 51-2, Rubidibacter lacunae UTEX L2944
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.