STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL32199.1Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (258 aa)    
Predicted Functional Partners:
SFL32218.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.994
SFM66397.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.982
SFM35682.1
Amino acid ABC transporter membrane protein, PAAT family /amino acid ABC transporter ATP-binding protein, PAAT family.
 0.960
SFL32237.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.953
SFL54779.1
L-glutamate ABC transporter membrane protein.
 0.932
SFL36800.1
Glutamate/aspartate transport system permease protein.
 0.919
SFL54801.1
L-glutamate ABC transporter membrane protein.
 0.919
SFL36820.1
L-glutamate ABC transporter membrane protein.
 0.905
SFM47524.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.888
SFL55977.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.887
Your Current Organism:
Methylobacterium pseudosasicola
NCBI taxonomy Id: 582667
Other names: ICMP 17621, M. pseudosasicola, Methylobacterium pseudosasicola Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL36, NBRC 105203, strain BL36
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