STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL33029.1MFS transporter, AAHS family, 4-hydroxybenzoate transporter. (456 aa)    
Predicted Functional Partners:
SFL33013.1
P-hydroxybenzoate 3-monooxygenase.
 
   
 0.832
SFL33090.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
   
 0.690
SFL33105.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
     
 0.641
SFL33048.1
Protocatechuate 3,4-dioxygenase, beta subunit.
     
 0.640
SFL33066.1
Protocatechuate 3,4-dioxygenase, alpha subunit.
     
 0.640
SFL32991.1
Transcriptional regulator, AraC family.
 
     0.629
SFL72160.1
Reductase C-terminal.
  
  
 0.606
SFL76244.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.576
SFL24237.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
     
 0.529
SFM72186.1
MFS transporter, ACS family, glucarate transporter.
  
  
  0.490
Your Current Organism:
Methylobacterium pseudosasicola
NCBI taxonomy Id: 582667
Other names: ICMP 17621, M. pseudosasicola, Methylobacterium pseudosasicola Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL36, NBRC 105203, strain BL36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.