STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL55933.1Amino acid ABC transporter substrate-binding protein, PAAT family. (267 aa)    
Predicted Functional Partners:
SFL55956.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.990
SFL55977.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.990
SFM35682.1
Amino acid ABC transporter membrane protein, PAAT family /amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.972
SFL32218.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.903
SFM47913.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.900
SFL54779.1
L-glutamate ABC transporter membrane protein.
 0.895
SFL36800.1
Glutamate/aspartate transport system permease protein.
 0.891
SFL36781.1
L-glutamate ABC transporter ATP-binding protein.
 
 0.890
SFL54754.1
L-glutamate ABC transporter ATP-binding protein.
 
 0.890
SFM66397.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.890
Your Current Organism:
Methylobacterium pseudosasicola
NCBI taxonomy Id: 582667
Other names: ICMP 17621, M. pseudosasicola, Methylobacterium pseudosasicola Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL36, NBRC 105203, strain BL36
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