STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL67478.12-dehydro-3-deoxygalactonokinase. (292 aa)    
Predicted Functional Partners:
SFL67505.1
2-keto-3-deoxy-phosphogalactonate aldolase.
 
  
 0.987
SFM72208.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.817
SFM26875.1
Altronate hydrolase.
  
  
 0.805
SFL33328.1
D-glucarate dehydratase.
 
 
 0.773
SFM00193.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.770
SFL22451.1
Galactarate dehydratase.
  
  
 0.760
SFM23644.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.743
SFL60575.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.731
SFM70660.1
L-alanine-DL-glutamate epimerase.
 
 
 0.701
SFL41759.1
L-alanine-DL-glutamate epimerase.
  
 
 0.654
Your Current Organism:
Methylobacterium pseudosasicola
NCBI taxonomy Id: 582667
Other names: ICMP 17621, M. pseudosasicola, Methylobacterium pseudosasicola Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL36, NBRC 105203, strain BL36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.