Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL25244.1 | SFL76137.1 | SAMN05192568_1002213 | SAMN05192568_101027 | Acetyltransferase. | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | 0.799 |
SFL25244.1 | SFL77149.1 | SAMN05192568_1002213 | SAMN05192568_101078 | Acetyltransferase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.796 |
SFL25244.1 | SFM07008.1 | SAMN05192568_1002213 | SAMN05192568_101855 | Acetyltransferase. | Dihydrolipoamide dehydrogenase. | 0.788 |
SFL25244.1 | SFM74465.1 | SAMN05192568_1002213 | SAMN05192568_10528 | Acetyltransferase. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.876 |
SFL25244.1 | leuA | SAMN05192568_1002213 | SAMN05192568_1015104 | Acetyltransferase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.763 |
SFL76137.1 | SFL25244.1 | SAMN05192568_101027 | SAMN05192568_1002213 | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | Acetyltransferase. | 0.799 |
SFL76137.1 | SFL77149.1 | SAMN05192568_101027 | SAMN05192568_101078 | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.807 |
SFL76137.1 | SFM07008.1 | SAMN05192568_101027 | SAMN05192568_101855 | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | Dihydrolipoamide dehydrogenase. | 0.793 |
SFL76137.1 | SFM10174.1 | SAMN05192568_101027 | SAMN05192568_101965 | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | Tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase. | 0.809 |
SFL76137.1 | SFM19993.1 | SAMN05192568_101027 | SAMN05192568_102266 | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | Acetolactate synthase, small subunit. | 0.975 |
SFL76137.1 | SFM74465.1 | SAMN05192568_101027 | SAMN05192568_10528 | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.867 |
SFL76137.1 | ilvA | SAMN05192568_101027 | SAMN05192568_101171 | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.777 |
SFL76137.1 | ilvC | SAMN05192568_101027 | SAMN05192568_102271 | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.921 |
SFL76137.1 | leuA | SAMN05192568_101027 | SAMN05192568_1015104 | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.842 |
SFL76137.1 | leuB | SAMN05192568_101027 | SAMN05192568_1015105 | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.815 |
SFL77149.1 | SFL25244.1 | SAMN05192568_101078 | SAMN05192568_1002213 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Acetyltransferase. | 0.796 |
SFL77149.1 | SFL76137.1 | SAMN05192568_101078 | SAMN05192568_101027 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. | 0.807 |
SFL77149.1 | SFM07008.1 | SAMN05192568_101078 | SAMN05192568_101855 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Dihydrolipoamide dehydrogenase. | 0.999 |
SFL77149.1 | SFM10174.1 | SAMN05192568_101078 | SAMN05192568_101965 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase. | 0.841 |
SFL77149.1 | SFM19993.1 | SAMN05192568_101078 | SAMN05192568_102266 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Acetolactate synthase, small subunit. | 0.868 |
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