STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL76413.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
SFL76391.1
16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.628
hisS
histidyl-tRNA synthetase.
  
     0.600
SFL53293.1
dCTP deaminase.
  
     0.589
SFL41370.1
NifU homolog involved in Fe-S cluster formation.
  
     0.525
SFL62283.1
Protein of unknown function.
  
     0.511
SFL76526.1
Protein of unknown function.
  
     0.511
SFM10308.1
Hypothetical protein.
  
     0.496
SFM01560.1
GcrA cell cycle regulator.
  
     0.469
SFL71796.1
Two-component system, sensor histidine kinase RegB.
  
     0.454
SFL41865.1
Hypothetical protein.
  
     0.429
Your Current Organism:
Methylobacterium pseudosasicola
NCBI taxonomy Id: 582667
Other names: ICMP 17621, M. pseudosasicola, Methylobacterium pseudosasicola Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL36, NBRC 105203, strain BL36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.