STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL89746.1Uncharacterized membrane protein. (549 aa)    
Predicted Functional Partners:
SFL89714.1
Flp pilus assembly protein TadG.
 
     0.955
SFL12785.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.714
SFL12734.1
Pilus assembly protein CpaF.
 
  
 0.697
SFM73688.1
Pilus formation protein N terminal region.
 
  
 0.671
SFL12701.1
Tight adherence protein C.
 
  
 0.670
SFL12752.1
Pilus assembly protein CpaE.
 
  
 0.632
SFM20427.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.620
modC
Molybdate transport system ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
       0.522
SFL16892.1
Flp pilus assembly protein TadD, contains TPR repeats.
 
  
 0.508
SFL12802.1
Pilus assembly protein CpaB.
 
  
 0.508
Your Current Organism:
Methylobacterium pseudosasicola
NCBI taxonomy Id: 582667
Other names: ICMP 17621, M. pseudosasicola, Methylobacterium pseudosasicola Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL36, NBRC 105203, strain BL36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.