STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL98650.1Putative N-acetyltransferase, MSMEG_0567 N-terminal domain family. (181 aa)    
Predicted Functional Partners:
SFL98695.1
Aliphatic nitrilase.
 
  
  0.961
SFL98668.1
Radical SAM protein, MSMEG_0568 family.
 
   
 0.959
SFL98600.1
MSMEG_0570 family protein.
 
     0.955
SFL98640.1
Hypothetical protein.
 
     0.955
SFL98618.1
Glycosyltransferase, MSMEG_0565 family.
 
     0.949
SFL98581.1
Putative flavoprotein involved in K+ transport.
 
     0.930
SFL98713.1
GTP cyclohydrolase II.
 
   
 0.916
SFM26441.1
MSMEG_0570 family protein.
 
     0.793
SFL98738.1
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain.
 
     0.778
SFM26423.1
Glycosyltransferase, MSMEG_0565 family.
  
     0.756
Your Current Organism:
Methylobacterium pseudosasicola
NCBI taxonomy Id: 582667
Other names: ICMP 17621, M. pseudosasicola, Methylobacterium pseudosasicola Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL36, NBRC 105203, strain BL36
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