Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM09055.1 | SFM09095.1 | SAMN05192568_101910 | SAMN05192568_101912 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.533 |
SFM09055.1 | lysA | SAMN05192568_101910 | SAMN05192568_101911 | Glycosyltransferase involved in cell wall bisynthesis. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.801 |
SFM09095.1 | SFM09055.1 | SAMN05192568_101912 | SAMN05192568_101910 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.533 |
SFM09095.1 | SFM09118.1 | SAMN05192568_101912 | SAMN05192568_101913 | Hypothetical protein. | Hypothetical protein. | 0.573 |
SFM09095.1 | lysA | SAMN05192568_101912 | SAMN05192568_101911 | Hypothetical protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.569 |
SFM09118.1 | SFM09095.1 | SAMN05192568_101913 | SAMN05192568_101912 | Hypothetical protein. | Hypothetical protein. | 0.573 |
lysA | SFM09055.1 | SAMN05192568_101911 | SAMN05192568_101910 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Glycosyltransferase involved in cell wall bisynthesis. | 0.801 |
lysA | SFM09095.1 | SAMN05192568_101911 | SAMN05192568_101912 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Hypothetical protein. | 0.569 |