STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM35794.1FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. (466 aa)    
Predicted Functional Partners:
SFL82174.1
Amino acid adenylation domain-containing protein.
   
 0.816
SFM35816.1
Acetyltransferase (GNAT) family protein.
 
     0.695
SFM22791.1
FMN reductase.
  
 0.648
SFM28448.1
FMN reductase.
  
 0.621
SFM16844.1
Alkanesulfonate monooxygenase.
  
     0.611
SFL60211.1
NADPH-dependent FMN reductase.
  
 0.602
SFL97529.1
NAD(P)H-dependent FMN reductase.
  
 0.602
SFL88754.1
Arsenical resistance protein ArsH.
  
 0.595
SFL24237.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
   
 
 0.585
SFL75809.1
Alkanesulfonate monooxygenase.
  
     0.583
Your Current Organism:
Methylobacterium pseudosasicola
NCBI taxonomy Id: 582667
Other names: ICMP 17621, M. pseudosasicola, Methylobacterium pseudosasicola Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL36, NBRC 105203, strain BL36
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