Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL76935.1 | SFL92400.1 | SAMN05192568_101068 | SAMN05192568_101420 | Diguanylate cyclase. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.648 |
SFL76935.1 | SFL98337.1 | SAMN05192568_101068 | SAMN05192568_1015108 | Diguanylate cyclase. | PAS domain S-box-containing protein. | 0.863 |
SFL76935.1 | SFM03962.1 | SAMN05192568_101068 | SAMN05192568_101753 | Diguanylate cyclase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.849 |
SFL76935.1 | SFM12850.1 | SAMN05192568_101068 | SAMN05192568_102030 | Diguanylate cyclase. | PAS domain S-box-containing protein. | 0.863 |
SFL76935.1 | SFM13349.1 | SAMN05192568_101068 | SAMN05192568_102062 | Diguanylate cyclase. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.671 |
SFL76935.1 | SFM47712.1 | SAMN05192568_101068 | SAMN05192568_103338 | Diguanylate cyclase. | PAS domain S-box-containing protein. | 0.935 |
SFL76935.1 | SFM52299.1 | SAMN05192568_101068 | SAMN05192568_103611 | Diguanylate cyclase. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.945 |
SFL76935.1 | SFM63692.1 | SAMN05192568_101068 | SAMN05192568_104220 | Diguanylate cyclase. | PAS domain S-box-containing protein. | 0.863 |
SFL76935.1 | SFM86847.1 | SAMN05192568_101068 | SAMN05192568_10683 | Diguanylate cyclase. | Hypothetical protein. | 0.876 |
SFL76935.1 | SFM95845.1 | SAMN05192568_101068 | SAMN05192568_10863 | Diguanylate cyclase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.541 |
SFL92400.1 | SFL76935.1 | SAMN05192568_101420 | SAMN05192568_101068 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase. | 0.648 |
SFL92400.1 | SFL98337.1 | SAMN05192568_101420 | SAMN05192568_1015108 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.869 |
SFL92400.1 | SFM03962.1 | SAMN05192568_101420 | SAMN05192568_101753 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.850 |
SFL92400.1 | SFM12850.1 | SAMN05192568_101420 | SAMN05192568_102030 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.868 |
SFL92400.1 | SFM13349.1 | SAMN05192568_101420 | SAMN05192568_102062 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.594 |
SFL92400.1 | SFM47712.1 | SAMN05192568_101420 | SAMN05192568_103338 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.937 |
SFL92400.1 | SFM52299.1 | SAMN05192568_101420 | SAMN05192568_103611 | Diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.946 |
SFL92400.1 | SFM63692.1 | SAMN05192568_101420 | SAMN05192568_104220 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.861 |
SFL92400.1 | SFM86847.1 | SAMN05192568_101420 | SAMN05192568_10683 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.871 |
SFL92400.1 | SFM95845.1 | SAMN05192568_101420 | SAMN05192568_10863 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.542 |
page 1 of 6