STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM66397.1Amino acid ABC transporter membrane protein, PAAT family. (217 aa)    
Predicted Functional Partners:
SFM66378.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.998
SFM66412.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
  0.986
SFL32199.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.982
SFM47913.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.982
SFL32237.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.966
SFL36781.1
L-glutamate ABC transporter ATP-binding protein.
 0.965
SFL54754.1
L-glutamate ABC transporter ATP-binding protein.
 0.965
SFM47499.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.965
SFM35682.1
Amino acid ABC transporter membrane protein, PAAT family /amino acid ABC transporter ATP-binding protein, PAAT family.
 
0.935
SFL55933.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.890
Your Current Organism:
Methylobacterium pseudosasicola
NCBI taxonomy Id: 582667
Other names: ICMP 17621, M. pseudosasicola, Methylobacterium pseudosasicola Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL36, NBRC 105203, strain BL36
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