STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM88124.1Glycosyltransferase, GT2 family. (291 aa)    
Predicted Functional Partners:
SFM88140.1
Hypothetical protein.
 
   
 0.795
SFM75752.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.630
SFM85407.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.586
SFL23136.1
O-antigen biosynthesis protein WbqV.
  
 
 0.572
SFN00857.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.560
SFL40407.1
Exopolysaccharide production protein ExoY.
 
 
 0.557
SFM75704.1
Exopolysaccharide production protein ExoY.
 
 
 0.554
SFM75230.1
Exopolysaccharide production protein ExoY.
 
 
 0.554
SFM19696.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.504
SFM75776.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase.
  
  
 0.504
Your Current Organism:
Methylobacterium pseudosasicola
NCBI taxonomy Id: 582667
Other names: ICMP 17621, M. pseudosasicola, Methylobacterium pseudosasicola Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL36, NBRC 105203, strain BL36
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