STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM67950.1Hypothetical protein. (99 aa)    
Predicted Functional Partners:
SDM67816.1
Hypothetical protein.
       0.773
SDM67847.1
Hypothetical protein.
       0.773
SDM67885.1
Lysozyme.
       0.773
SDM67917.1
Hypothetical protein.
       0.773
SDM67984.1
Hypothetical protein.
       0.773
SDM68019.1
Hypothetical protein.
       0.773
SDM68055.1
Hypothetical protein.
       0.588
SDM68091.1
Hypothetical protein.
       0.588
SDM68130.1
Hypothetical protein.
       0.520
SDM68161.1
Hypothetical protein.
       0.520
Your Current Organism:
Methylobacterium phyllostachyos
NCBI taxonomy Id: 582672
Other names: ICMP 17619, M. phyllostachyos, Methylobacterium phyllostachyos Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL47, NBRC 105206, strain BL47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.