STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN20440.1Two-component sensor histidine kinase, contains HisKA and HATPase domains. (354 aa)    
Predicted Functional Partners:
SDN20383.1
PAS domain S-box-containing protein.
 0.957
SDO64507.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.936
SDN20408.1
Response regulator receiver domain-containing protein.
 
0.909
SDN27976.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 0.902
SDO60055.1
PAS domain S-box-containing protein.
 
 0.900
SDM69619.1
PAS domain S-box-containing protein.
 0.891
SDM54042.1
PAS domain S-box-containing protein.
 
 0.889
SDN29838.1
PAS domain S-box-containing protein.
 0.889
SDN39452.1
PAS domain S-box-containing protein.
 
 0.886
SDM55574.1
PAS domain S-box-containing protein.
 
 0.885
Your Current Organism:
Methylobacterium phyllostachyos
NCBI taxonomy Id: 582672
Other names: ICMP 17619, M. phyllostachyos, Methylobacterium phyllostachyos Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL47, NBRC 105206, strain BL47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.