Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM24331.1 | SDN35000.1 | SAMN05216360_101308 | SAMN05216360_107277 | 16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | ETC complex I subunit conserved region. | 0.512 |
SDM24331.1 | SDO28952.1 | SAMN05216360_101308 | SAMN05216360_11896 | 16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Methyltransferase domain-containing protein. | 0.487 |
SDM75533.1 | SDN35000.1 | SAMN05216360_103294 | SAMN05216360_107277 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | ETC complex I subunit conserved region. | 0.550 |
SDN01619.1 | SDN35000.1 | SAMN05216360_10581 | SAMN05216360_107277 | Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | ETC complex I subunit conserved region. | 0.429 |
SDN35000.1 | SDM24331.1 | SAMN05216360_107277 | SAMN05216360_101308 | ETC complex I subunit conserved region. | 16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.512 |
SDN35000.1 | SDM75533.1 | SAMN05216360_107277 | SAMN05216360_103294 | ETC complex I subunit conserved region. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.550 |
SDN35000.1 | SDN01619.1 | SAMN05216360_107277 | SAMN05216360_10581 | ETC complex I subunit conserved region. | Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.429 |
SDN35000.1 | SDN35024.1 | SAMN05216360_107277 | SAMN05216360_107278 | ETC complex I subunit conserved region. | Hypothetical protein. | 0.738 |
SDN35000.1 | SDN35051.1 | SAMN05216360_107277 | SAMN05216360_107279 | ETC complex I subunit conserved region. | Hypothetical protein. | 0.720 |
SDN35000.1 | SDN35083.1 | SAMN05216360_107277 | SAMN05216360_107280 | ETC complex I subunit conserved region. | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | 0.523 |
SDN35000.1 | SDN35105.1 | SAMN05216360_107277 | SAMN05216360_107281 | ETC complex I subunit conserved region. | Molecular chaperone IbpA; Belongs to the small heat shock protein (HSP20) family. | 0.436 |
SDN35000.1 | SDN98952.1 | SAMN05216360_107277 | SAMN05216360_113131 | ETC complex I subunit conserved region. | Uridine kinase. | 0.515 |
SDN35000.1 | SDO28952.1 | SAMN05216360_107277 | SAMN05216360_11896 | ETC complex I subunit conserved region. | Methyltransferase domain-containing protein. | 0.872 |
SDN35000.1 | der | SAMN05216360_107277 | SAMN05216360_11561 | ETC complex I subunit conserved region. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.465 |
SDN35024.1 | SDN35000.1 | SAMN05216360_107278 | SAMN05216360_107277 | Hypothetical protein. | ETC complex I subunit conserved region. | 0.738 |
SDN35024.1 | SDN35051.1 | SAMN05216360_107278 | SAMN05216360_107279 | Hypothetical protein. | Hypothetical protein. | 0.784 |
SDN35024.1 | SDN35083.1 | SAMN05216360_107278 | SAMN05216360_107280 | Hypothetical protein. | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | 0.561 |
SDN35051.1 | SDN35000.1 | SAMN05216360_107279 | SAMN05216360_107277 | Hypothetical protein. | ETC complex I subunit conserved region. | 0.720 |
SDN35051.1 | SDN35024.1 | SAMN05216360_107279 | SAMN05216360_107278 | Hypothetical protein. | Hypothetical protein. | 0.784 |
SDN35051.1 | SDN35083.1 | SAMN05216360_107279 | SAMN05216360_107280 | Hypothetical protein. | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | 0.597 |
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