STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN64983.1DNA-binding transcriptional regulator, AcrR family. (174 aa)    
Predicted Functional Partners:
SDO19707.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.752
SDN65014.1
Membrane fusion protein, multidrug efflux system.
 
   
 0.582
SDN65080.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
   
 0.581
SDN65047.1
MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.
     
 0.511
SDO42865.1
Acyl transferase domain-containing protein.
    
 0.460
pth
peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.436
SDM74458.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.430
SDM91208.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.430
SDO26666.1
Choline dehydrogenase.
  
 
 0.414
Your Current Organism:
Methylobacterium phyllostachyos
NCBI taxonomy Id: 582672
Other names: ICMP 17619, M. phyllostachyos, Methylobacterium phyllostachyos Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL47, NBRC 105206, strain BL47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.