STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN69921.1Glycosyltransferase involved in cell wall bisynthesis. (377 aa)    
Predicted Functional Partners:
SDN69862.1
CDP-paratose 2-epimerase.
 
 
 0.979
SDN69834.1
dTDP-L-rhamnose 4-epimerase.
 
 
  0.971
SDN69947.1
Spore maturation protein CgeB.
    0.960
SDN69976.1
Spore maturation protein CgeB.
 
    0.956
SDN70010.1
Spore maturation protein CgeB.
 
    0.952
SDN69889.1
B12-binding domain/radical SAM domain protein, rhizo-twelve system.
 
     0.938
SDN70155.1
tRNA (mo5U34)-methyltransferase.
 
  
 0.885
SDN70189.1
Beta-xylosidase.
 
     0.859
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.858
SDN70050.1
UDP-glucuronate decarboxylase.
 
 
  0.809
Your Current Organism:
Methylobacterium phyllostachyos
NCBI taxonomy Id: 582672
Other names: ICMP 17619, M. phyllostachyos, Methylobacterium phyllostachyos Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL47, NBRC 105206, strain BL47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.