STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN71568.1DNA-binding transcriptional regulator, GntR family. (226 aa)    
Predicted Functional Partners:
SDN69677.1
DNA-binding transcriptional regulator, FadR family.
 
  
 0.778
SDO09299.1
DNA-binding transcriptional regulator, GntR family.
  
     0.774
SDO27864.1
DNA-binding transcriptional regulator, GntR family.
  
     0.774
SDN71535.1
Xaa-Pro dipeptidase.
       0.749
SDN17368.1
DNA-binding transcriptional regulator, GntR family.
  
     0.748
SDN71603.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
     0.634
SDN71636.1
Amino acid ABC transporter membrane protein, PAAT family.
       0.462
SDM26554.1
Acetolactate synthase, small subunit.
   
    0.430
SDN71670.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
       0.413
Your Current Organism:
Methylobacterium phyllostachyos
NCBI taxonomy Id: 582672
Other names: ICMP 17619, M. phyllostachyos, Methylobacterium phyllostachyos Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL47, NBRC 105206, strain BL47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.