STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN86531.1DNA-binding transcriptional regulator, MarR family. (158 aa)    
Predicted Functional Partners:
SDN86561.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
  
 0.765
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
    
 0.739
SDO42865.1
Acyl transferase domain-containing protein.
  
 
 0.491
SDN07204.1
Fructokinase.
  
  
 0.456
SDN70088.1
Myo-inositol-1-phosphate synthase.
 
  
  0.452
SDO64432.1
Nucleoside-diphosphate-sugar epimerase.
  
  
  0.446
SDN45661.1
Glyoxalase family protein.
    
 0.421
SDN55595.1
Glyoxalase family protein.
    
 0.421
SDN47915.1
DNA-binding transcriptional regulator, IclR family.
   
 
 0.409
SDO64403.1
Helix-turn-helix domain-containing protein.
  
 
 
 0.401
Your Current Organism:
Methylobacterium phyllostachyos
NCBI taxonomy Id: 582672
Other names: ICMP 17619, M. phyllostachyos, Methylobacterium phyllostachyos Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL47, NBRC 105206, strain BL47
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