STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN98087.1PepSY-associated TM region. (482 aa)    
Predicted Functional Partners:
SDN98108.1
Iron complex outermembrane recepter protein.
 
  
 0.954
SDM27706.1
Sulfide:quinone oxidoreductase.
  
  
  0.757
SDO53553.1
Protein of unknown function.
  
    0.748
SDN58547.1
Hypothetical protein.
    
 0.739
SDO06410.1
NAD(P)H-dependent nitrite reductase flavoprotein subunit.
    
  0.730
SDN48278.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
     
 0.728
SDN35496.1
Iron complex outermembrane recepter protein.
 
  
 0.663
SDN35460.1
Iron complex outermembrane recepter protein.
 
  
 0.603
SDN88787.1
NADH dehydrogenase.
  
  
  0.546
SDN98126.1
Hypothetical protein.
       0.532
Your Current Organism:
Methylobacterium phyllostachyos
NCBI taxonomy Id: 582672
Other names: ICMP 17619, M. phyllostachyos, Methylobacterium phyllostachyos Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL47, NBRC 105206, strain BL47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.