Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM16200.1 | SDM85533.1 | SAMN05216360_10116 | SAMN05216360_10444 | Capsular polysaccharide transport system ATP-binding protein. | Protoporphyrinogen oxidase. | 0.419 |
SDM16200.1 | SDO23903.1 | SAMN05216360_10116 | SAMN05216360_11761 | Capsular polysaccharide transport system ATP-binding protein. | comF family protein. | 0.858 |
SDM16200.1 | SDO49906.1 | SAMN05216360_10116 | SAMN05216360_12454 | Capsular polysaccharide transport system ATP-binding protein. | Cyclohexadieny/prephenate dehydrogenase. | 0.420 |
SDM16200.1 | apt | SAMN05216360_10116 | SAMN05216360_109264 | Capsular polysaccharide transport system ATP-binding protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.729 |
SDM46974.1 | SDM51577.1 | SAMN05216360_102183 | SAMN05216360_102312 | DNA repair protein RadC; Belongs to the UPF0758 family. | DNA processing protein. | 0.683 |
SDM46974.1 | SDM87092.1 | SAMN05216360_102183 | SAMN05216360_10494 | DNA repair protein RadC; Belongs to the UPF0758 family. | Magnesium chelatase family protein. | 0.427 |
SDM46974.1 | SDN04158.1 | SAMN05216360_102183 | SAMN05216360_105174 | DNA repair protein RadC; Belongs to the UPF0758 family. | Competence protein ComEC. | 0.799 |
SDM46974.1 | SDN41567.1 | SAMN05216360_102183 | SAMN05216360_10874 | DNA repair protein RadC; Belongs to the UPF0758 family. | Flagellar motility protein MotE, a chaperone for MotC folding. | 0.433 |
SDM46974.1 | SDN99131.1 | SAMN05216360_102183 | SAMN05216360_113139 | DNA repair protein RadC; Belongs to the UPF0758 family. | Flagellar motility protein MotE, a chaperone for MotC folding. | 0.457 |
SDM46974.1 | SDO23903.1 | SAMN05216360_102183 | SAMN05216360_11761 | DNA repair protein RadC; Belongs to the UPF0758 family. | comF family protein. | 0.910 |
SDM51577.1 | SDM46974.1 | SAMN05216360_102312 | SAMN05216360_102183 | DNA processing protein. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.683 |
SDM51577.1 | SDM87092.1 | SAMN05216360_102312 | SAMN05216360_10494 | DNA processing protein. | Magnesium chelatase family protein. | 0.894 |
SDM51577.1 | SDN04158.1 | SAMN05216360_102312 | SAMN05216360_105174 | DNA processing protein. | Competence protein ComEC. | 0.890 |
SDM51577.1 | SDN41567.1 | SAMN05216360_102312 | SAMN05216360_10874 | DNA processing protein. | Flagellar motility protein MotE, a chaperone for MotC folding. | 0.540 |
SDM51577.1 | SDN99131.1 | SAMN05216360_102312 | SAMN05216360_113139 | DNA processing protein. | Flagellar motility protein MotE, a chaperone for MotC folding. | 0.717 |
SDM51577.1 | SDO23903.1 | SAMN05216360_102312 | SAMN05216360_11761 | DNA processing protein. | comF family protein. | 0.962 |
SDM85533.1 | SDM16200.1 | SAMN05216360_10444 | SAMN05216360_10116 | Protoporphyrinogen oxidase. | Capsular polysaccharide transport system ATP-binding protein. | 0.419 |
SDM85533.1 | SDO23903.1 | SAMN05216360_10444 | SAMN05216360_11761 | Protoporphyrinogen oxidase. | comF family protein. | 0.871 |
SDM85533.1 | SDO49906.1 | SAMN05216360_10444 | SAMN05216360_12454 | Protoporphyrinogen oxidase. | Cyclohexadieny/prephenate dehydrogenase. | 0.437 |
SDM87092.1 | SDM46974.1 | SAMN05216360_10494 | SAMN05216360_102183 | Magnesium chelatase family protein. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.427 |
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