STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO32277.1Hypothetical protein. (44 aa)    
Predicted Functional Partners:
SDO23903.1
comF family protein.
   
    0.627
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.588
SDO32251.1
Hypothetical protein.
       0.549
SDO42865.1
Acyl transferase domain-containing protein.
    
 0.530
SDM50791.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.490
SDO49906.1
Cyclohexadieny/prephenate dehydrogenase.
  
    0.487
hslV
ATP-dependent HslUV protease, peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
  
 0.427
SDO32312.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.423
SDM16200.1
Capsular polysaccharide transport system ATP-binding protein.
   
    0.422
SDN78029.1
Hypothetical protein.
    
  0.422
Your Current Organism:
Methylobacterium phyllostachyos
NCBI taxonomy Id: 582672
Other names: ICMP 17619, M. phyllostachyos, Methylobacterium phyllostachyos Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL47, NBRC 105206, strain BL47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.