STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO68458.1GAF domain-containing protein. (189 aa)    
Predicted Functional Partners:
SDO41736.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.991
SDM89558.1
PAS domain S-box-containing protein.
  
 0.980
SDM55606.1
PAS domain S-box-containing protein.
  
 0.979
SDN13856.1
Dihydrolipoamide dehydrogenase.
    
 0.973
SDO60055.1
PAS domain S-box-containing protein.
  
 0.970
SDN39476.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.962
SDO69262.1
PAS domain S-box-containing protein.
 
 0.955
SDN67004.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
   
 0.943
SDM53369.1
PAS domain S-box-containing protein.
  
 0.936
SDM54042.1
PAS domain S-box-containing protein.
  
 0.936
Your Current Organism:
Methylobacterium phyllostachyos
NCBI taxonomy Id: 582672
Other names: ICMP 17619, M. phyllostachyos, Methylobacterium phyllostachyos Madhaiyan and Poonguzhali 2014, Methylobacterium sp. BL47, NBRC 105206, strain BL47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.