STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG55065.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
purK
5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
       0.564
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.564
SFH05792.1
Ribbon-helix-helix domain-containing protein.
  
     0.546
SFG55078.1
Hypothetical protein.
       0.508
rpmJ
LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.
 
     0.474
SFG55016.1
Uncharacterized conserved protein GlcG, DUF336 family.
       0.471
SFG54970.1
Oligopeptide transport system permease protein.
       0.465
SFG54985.1
Oligopeptide transport system permease protein.
       0.465
SFG54996.1
Oligopeptide transport system substrate-binding protein.
       0.465
SFG55981.1
Protein of unknown function.
  
     0.414
Your Current Organism:
Methylobacterium gossipiicola
NCBI taxonomy Id: 582675
Other names: CCM 7572, M. gossipiicola, Methylobacterium gossipiicola Madhaiyan et al. 2012, Methylobacterium sp. Gh-105, NRRL B-51692, strain Gh-105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.