STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG79935.1Site-specific DNA recombinase. (221 aa)    
Predicted Functional Partners:
SFG77966.1
Resolvase, N terminal domain.
  
     0.774
SFG63215.1
Site-specific DNA recombinase.
  
     0.772
SFG79951.1
Hypothetical protein.
       0.479
vapC-2
PIN domain nuclease, a component of toxin-antitoxin system (PIN domain); Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.479
Your Current Organism:
Methylobacterium gossipiicola
NCBI taxonomy Id: 582675
Other names: CCM 7572, M. gossipiicola, Methylobacterium gossipiicola Madhaiyan et al. 2012, Methylobacterium sp. Gh-105, NRRL B-51692, strain Gh-105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.