Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG60695.1 | SFG93980.1 | SAMN05192565_106161 | SAMN05192565_11849 | Beta-alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.433 |
SFG93950.1 | SFG93967.1 | SAMN05192565_11847 | SAMN05192565_11848 | Hypothetical protein. | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | 0.543 |
SFG93950.1 | SFG93980.1 | SAMN05192565_11847 | SAMN05192565_11849 | Hypothetical protein. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.543 |
SFG93967.1 | SFG93950.1 | SAMN05192565_11848 | SAMN05192565_11847 | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | Hypothetical protein. | 0.543 |
SFG93967.1 | SFG93980.1 | SAMN05192565_11848 | SAMN05192565_11849 | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.811 |
SFG93980.1 | SFG60695.1 | SAMN05192565_11849 | SAMN05192565_106161 | Permease of the drug/metabolite transporter (DMT) superfamily. | Beta-alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.433 |
SFG93980.1 | SFG93950.1 | SAMN05192565_11849 | SAMN05192565_11847 | Permease of the drug/metabolite transporter (DMT) superfamily. | Hypothetical protein. | 0.543 |
SFG93980.1 | SFG93967.1 | SAMN05192565_11849 | SAMN05192565_11848 | Permease of the drug/metabolite transporter (DMT) superfamily. | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | 0.811 |