Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arlR_1 | senX3_1 | RS86_00751 | RS86_00750 | Response regulator ArlR. | Signal-transduction histidine kinase senX3. | 0.977 |
arlR_2 | senX3_1 | RS86_02256 | RS86_00750 | Response regulator ArlR. | Signal-transduction histidine kinase senX3. | 0.893 |
mtrA | senX3_1 | RS86_00046 | RS86_00750 | DNA-binding response regulator MtrA. | Signal-transduction histidine kinase senX3. | 0.896 |
phoP | senX3_1 | RS86_03296 | RS86_00750 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Signal-transduction histidine kinase senX3. | 0.891 |
regX3 | senX3_1 | RS86_03430 | RS86_00750 | Sensory transduction protein regX3. | Signal-transduction histidine kinase senX3. | 0.894 |
senX3_1 | arlR_1 | RS86_00750 | RS86_00751 | Signal-transduction histidine kinase senX3. | Response regulator ArlR. | 0.977 |
senX3_1 | arlR_2 | RS86_00750 | RS86_02256 | Signal-transduction histidine kinase senX3. | Response regulator ArlR. | 0.893 |
senX3_1 | mtrA | RS86_00750 | RS86_00046 | Signal-transduction histidine kinase senX3. | DNA-binding response regulator MtrA. | 0.896 |
senX3_1 | phoP | RS86_00750 | RS86_03296 | Signal-transduction histidine kinase senX3. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.891 |
senX3_1 | regX3 | RS86_00750 | RS86_03430 | Signal-transduction histidine kinase senX3. | Sensory transduction protein regX3. | 0.894 |
senX3_1 | tcrA_2 | RS86_00750 | RS86_01637 | Signal-transduction histidine kinase senX3. | Transcriptional regulatory protein TcrA. | 0.901 |
senX3_1 | tcrX_1 | RS86_00750 | RS86_00667 | Signal-transduction histidine kinase senX3. | Putative transcriptional regulatory protein TcrX. | 0.889 |
senX3_1 | tcrX_2 | RS86_00750 | RS86_02709 | Signal-transduction histidine kinase senX3. | Putative transcriptional regulatory protein TcrX. | 0.893 |
senX3_1 | tcrX_3 | RS86_00750 | RS86_03456 | Signal-transduction histidine kinase senX3. | Putative transcriptional regulatory protein TcrX. | 0.890 |
senX3_1 | walR | RS86_00750 | RS86_01088 | Signal-transduction histidine kinase senX3. | Transcriptional regulatory protein WalR. | 0.888 |
tcrA_2 | senX3_1 | RS86_01637 | RS86_00750 | Transcriptional regulatory protein TcrA. | Signal-transduction histidine kinase senX3. | 0.901 |
tcrX_1 | senX3_1 | RS86_00667 | RS86_00750 | Putative transcriptional regulatory protein TcrX. | Signal-transduction histidine kinase senX3. | 0.889 |
tcrX_2 | senX3_1 | RS86_02709 | RS86_00750 | Putative transcriptional regulatory protein TcrX. | Signal-transduction histidine kinase senX3. | 0.893 |
tcrX_3 | senX3_1 | RS86_03456 | RS86_00750 | Putative transcriptional regulatory protein TcrX. | Signal-transduction histidine kinase senX3. | 0.890 |
walR | senX3_1 | RS86_01088 | RS86_00750 | Transcriptional regulatory protein WalR. | Signal-transduction histidine kinase senX3. | 0.888 |