Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL34568.1 | KJL34570.1 | RS86_00823 | RS86_00825 | Hypothetical protein. | Putative ABC transporter ATP-binding protein. | 0.476 |
KJL34568.1 | yheI | RS86_00823 | RS86_00824 | Hypothetical protein. | Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI. | 0.476 |
KJL34570.1 | KJL34568.1 | RS86_00825 | RS86_00823 | Putative ABC transporter ATP-binding protein. | Hypothetical protein. | 0.476 |
KJL34570.1 | acpP | RS86_00825 | RS86_00499 | Putative ABC transporter ATP-binding protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.484 |
KJL34570.1 | cbpA | RS86_00825 | RS86_00818 | Putative ABC transporter ATP-binding protein. | Curved DNA-binding protein. | 0.485 |
KJL34570.1 | dnaK | RS86_00825 | RS86_00816 | Putative ABC transporter ATP-binding protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.686 |
KJL34570.1 | ftsH_1 | RS86_00825 | RS86_00420 | Putative ABC transporter ATP-binding protein. | ATP-dependent zinc metalloprotease FtsH; Belongs to the AAA ATPase family. | 0.566 |
KJL34570.1 | moeZ | RS86_00825 | RS86_01736 | Putative ABC transporter ATP-binding protein. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.508 |
KJL34570.1 | msbA | RS86_00825 | RS86_03270 | Putative ABC transporter ATP-binding protein. | Lipid A export ATP-binding/permease protein MsbA. | 0.802 |
KJL34570.1 | oppF_7 | RS86_00825 | RS86_03787 | Putative ABC transporter ATP-binding protein. | Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. | 0.515 |
KJL34570.1 | yheI | RS86_00825 | RS86_00824 | Putative ABC transporter ATP-binding protein. | Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI. | 0.845 |
KJL34570.1 | yxlF_2 | RS86_00825 | RS86_01028 | Putative ABC transporter ATP-binding protein. | Putative ABC transporter ATP-binding protein YxlF. | 0.497 |
acpP | KJL34570.1 | RS86_00499 | RS86_00825 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Putative ABC transporter ATP-binding protein. | 0.484 |
acpP | cbpA | RS86_00499 | RS86_00818 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Curved DNA-binding protein. | 0.848 |
acpP | dnaK | RS86_00499 | RS86_00816 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.405 |
acpP | moeZ | RS86_00499 | RS86_01736 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.537 |
acpP | yheI | RS86_00499 | RS86_00824 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI. | 0.484 |
cbpA | KJL34570.1 | RS86_00818 | RS86_00825 | Curved DNA-binding protein. | Putative ABC transporter ATP-binding protein. | 0.485 |
cbpA | acpP | RS86_00818 | RS86_00499 | Curved DNA-binding protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.848 |
cbpA | dnaK | RS86_00818 | RS86_00816 | Curved DNA-binding protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.999 |
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