STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywqDTyrosine-protein kinase YwqD. (555 aa)    
Predicted Functional Partners:
epsL
Putative sugar transferase EpsL.
 
 
 0.999
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
 
 
 0.988
etk
Tyrosine-protein kinase etk.
 
 
0.965
pknB
Serine/threonine-protein kinase PknB.
    
 
 0.812
spk1
Serine/threonine-protein kinase PK-1.
    
 
 0.812
pglF
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
 
 
 0.795
KJL34493.1
Hypothetical protein.
 
     0.749
ptp
Low molecular weight protein-tyrosine-phosphatase ptp.
 
 
 0.717
hcnA
Hydrogen cyanide synthase subunit HcnA.
    
 0.679
ylxH
Flagellum site-determining protein YlxH; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.623
Your Current Organism:
Microbacterium azadirachtae
NCBI taxonomy Id: 582680
Other names: DSM 23848, JCM 15681, KCTC 19668, LMG 24772, LMG:24772, M. azadirachtae, Microbacterium azadirachtae Madhaiyan et al. 2010, Microbacterium sp. AI-S262, strain AI-S262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.